Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav10nA0A075B622 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav10nA0A075B622 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav10nA0A075B622 App-207ENSMUST00000227737 2827 ntBASIC14.05□□□□□ -0.16
Trav10nA0A075B622 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav10nA0A075B622 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav10nA0A075B622 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav10nA0A075B622 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Trav10nA0A075B622 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav10nA0A075B622 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.05□□□□□ -0.16
Trav10nA0A075B622 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav10nA0A075B622 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav10nA0A075B622 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav10nA0A075B622 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav10nA0A075B622 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.05□□□□□ -0.16
Trav10nA0A075B622 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav10nA0A075B622 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav10nA0A075B622 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav10nA0A075B622 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav10nA0A075B622 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav10nA0A075B622 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav10nA0A075B622 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav10nA0A075B622 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav10nA0A075B622 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav10nA0A075B622 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Gm13312-201ENSMUST00000119631 718 ntBASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav10nA0A075B622 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav10nA0A075B622 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav10nA0A075B622 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav10nA0A075B622 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.03□□□□□ -0.16
Trav10nA0A075B622 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav10nA0A075B622 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav10nA0A075B622 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav10nA0A075B622 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav10nA0A075B622 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav10nA0A075B622 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav10nA0A075B622 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav10nA0A075B622 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms