Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav5-1A0A075B5Z7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav5-1A0A075B5Z7 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Mir5126-201ENSMUST00000175513 77 ntBASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-1A0A075B5Z7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Gm6443-201ENSMUST00000203599 874 ntBASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-1A0A075B5Z7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms