Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav1A0A075B5Z4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav1A0A075B5Z4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav1A0A075B5Z4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav1A0A075B5Z4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav1A0A075B5Z4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav1A0A075B5Z4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav1A0A075B5Z4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav1A0A075B5Z4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav1A0A075B5Z4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav1A0A075B5Z4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav1A0A075B5Z4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav1A0A075B5Z4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav1A0A075B5Z4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav1A0A075B5Z4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.69□□□□□ -0.06
Trav1A0A075B5Z4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
Trav1A0A075B5Z4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav1A0A075B5Z4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav1A0A075B5Z4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav1A0A075B5Z4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav1A0A075B5Z4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav1A0A075B5Z4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav1A0A075B5Z4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav1A0A075B5Z4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav1A0A075B5Z4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav1A0A075B5Z4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav1A0A075B5Z4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav1A0A075B5Z4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.68□□□□□ -0.06
Trav1A0A075B5Z4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav1A0A075B5Z4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.68□□□□□ -0.06
Trav1A0A075B5Z4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav1A0A075B5Z4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav1A0A075B5Z4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav1A0A075B5Z4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav1A0A075B5Z4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav1A0A075B5Z4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav1A0A075B5Z4 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav1A0A075B5Z4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav1A0A075B5Z4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Mir3081-201ENSMUST00000175305 84 ntBASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Gm7367-201ENSMUST00000057611 492 ntBASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav1A0A075B5Z4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Olfr129-201ENSMUST00000122318 993 ntBASIC14.66□□□□□ -0.06
Trav1A0A075B5Z4 Rprl3-201ENSMUST00000157400 290 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms