Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ClcnkaQ9WUB7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Gm27742-201ENSMUST00000184667 60 ntBASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ClcnkaQ9WUB7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClcnkaQ9WUB7 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
ClcnkaQ9WUB7 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ClcnkaQ9WUB7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ClcnkaQ9WUB7 Gm14859-201ENSMUST00000117752 357 ntBASIC14.6□□□□□ -0.07
ClcnkaQ9WUB7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.6□□□□□ -0.07
ClcnkaQ9WUB7 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
ClcnkaQ9WUB7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClcnkaQ9WUB7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.6□□□□□ -0.07
ClcnkaQ9WUB7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClcnkaQ9WUB7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.6□□□□□ -0.07
ClcnkaQ9WUB7 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClcnkaQ9WUB7 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.6□□□□□ -0.07
ClcnkaQ9WUB7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ClcnkaQ9WUB7 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClcnkaQ9WUB7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ClcnkaQ9WUB7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ClcnkaQ9WUB7 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClcnkaQ9WUB7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ClcnkaQ9WUB7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ClcnkaQ9WUB7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 Olfr129-201ENSMUST00000122318 993 ntBASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ClcnkaQ9WUB7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms