Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcsQ9WU84 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
CcsQ9WU84 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
CcsQ9WU84 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CcsQ9WU84 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CcsQ9WU84 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CcsQ9WU84 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.36□□□□□ -0.43
CcsQ9WU84 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
CcsQ9WU84 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcsQ9WU84 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcsQ9WU84 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CcsQ9WU84 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CcsQ9WU84 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.36□□□□□ -0.43
CcsQ9WU84 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.36□□□□□ -0.43
CcsQ9WU84 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcsQ9WU84 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcsQ9WU84 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CcsQ9WU84 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CcsQ9WU84 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcsQ9WU84 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CcsQ9WU84 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.36□□□□□ -0.43
CcsQ9WU84 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcsQ9WU84 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcsQ9WU84 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
CcsQ9WU84 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcsQ9WU84 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcsQ9WU84 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcsQ9WU84 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcsQ9WU84 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcsQ9WU84 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcsQ9WU84 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcsQ9WU84 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcsQ9WU84 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcsQ9WU84 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcsQ9WU84 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CcsQ9WU84 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CcsQ9WU84 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.35□□□□□ -0.43
CcsQ9WU84 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.35□□□□□ -0.43
CcsQ9WU84 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CcsQ9WU84 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CcsQ9WU84 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CcsQ9WU84 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CcsQ9WU84 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
CcsQ9WU84 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.35□□□□□ -0.43
CcsQ9WU84 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.35□□□□□ -0.43
CcsQ9WU84 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CcsQ9WU84 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.35□□□□□ -0.43
CcsQ9WU84 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
CcsQ9WU84 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CcsQ9WU84 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcsQ9WU84 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcsQ9WU84 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CcsQ9WU84 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcsQ9WU84 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcsQ9WU84 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcsQ9WU84 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CcsQ9WU84 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CcsQ9WU84 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.34□□□□□ -0.43
CcsQ9WU84 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.34□□□□□ -0.43
CcsQ9WU84 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.34□□□□□ -0.43
CcsQ9WU84 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcsQ9WU84 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.34□□□□□ -0.43
CcsQ9WU84 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcsQ9WU84 Gm5417-201ENSMUST00000079706 384 ntBASIC12.34□□□□□ -0.43
CcsQ9WU84 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcsQ9WU84 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcsQ9WU84 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcsQ9WU84 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CcsQ9WU84 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CcsQ9WU84 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CcsQ9WU84 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CcsQ9WU84 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CcsQ9WU84 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CcsQ9WU84 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CcsQ9WU84 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms