Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col13a1Q9R1N9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col13a1Q9R1N9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col13a1Q9R1N9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col13a1Q9R1N9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col13a1Q9R1N9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Col13a1Q9R1N9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.47□□□□□ -0.25
Col13a1Q9R1N9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.47□□□□□ -0.25
Col13a1Q9R1N9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.47□□□□□ -0.25
Col13a1Q9R1N9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.47□□□□□ -0.25
Col13a1Q9R1N9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col13a1Q9R1N9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Col13a1Q9R1N9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.47□□□□□ -0.25
Col13a1Q9R1N9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col13a1Q9R1N9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col13a1Q9R1N9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.47□□□□□ -0.25
Col13a1Q9R1N9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.47□□□□□ -0.25
Col13a1Q9R1N9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col13a1Q9R1N9 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col13a1Q9R1N9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col13a1Q9R1N9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col13a1Q9R1N9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Col13a1Q9R1N9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.46□□□□□ -0.25
Col13a1Q9R1N9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col13a1Q9R1N9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col13a1Q9R1N9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col13a1Q9R1N9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col13a1Q9R1N9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.46□□□□□ -0.25
Col13a1Q9R1N9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Col13a1Q9R1N9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.46□□□□□ -0.25
Col13a1Q9R1N9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.46□□□□□ -0.25
Col13a1Q9R1N9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.46□□□□□ -0.25
Col13a1Q9R1N9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.46□□□□□ -0.25
Col13a1Q9R1N9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col13a1Q9R1N9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col13a1Q9R1N9 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.46□□□□□ -0.25
Col13a1Q9R1N9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col13a1Q9R1N9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Col13a1Q9R1N9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col13a1Q9R1N9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col13a1Q9R1N9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col13a1Q9R1N9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Col13a1Q9R1N9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col13a1Q9R1N9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Col13a1Q9R1N9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col13a1Q9R1N9 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.44□□□□□ -0.26
Col13a1Q9R1N9 Mir8117-201ENSMUST00000184773 107 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms