Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn5aQ9JJV9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Scn5aQ9JJV9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.28■□□□□ 0.2
Scn5aQ9JJV9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn5aQ9JJV9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.28■□□□□ 0.2
Scn5aQ9JJV9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Scn5aQ9JJV9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.28■□□□□ 0.2
Scn5aQ9JJV9 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn5aQ9JJV9 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Scn5aQ9JJV9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn5aQ9JJV9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn5aQ9JJV9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn5aQ9JJV9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn5aQ9JJV9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.27■□□□□ 0.2
Scn5aQ9JJV9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.27■□□□□ 0.2
Scn5aQ9JJV9 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.27■□□□□ 0.2
Scn5aQ9JJV9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn5aQ9JJV9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Scn5aQ9JJV9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Scn5aQ9JJV9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Scn5aQ9JJV9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn5aQ9JJV9 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Scn5aQ9JJV9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn5aQ9JJV9 Rpph1-201ENSMUST00000175096 319 ntBASIC16.27■□□□□ 0.2
Scn5aQ9JJV9 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.27■□□□□ 0.2
Scn5aQ9JJV9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn5aQ9JJV9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.27■□□□□ 0.2
Scn5aQ9JJV9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn5aQ9JJV9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Scn5aQ9JJV9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn5aQ9JJV9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn5aQ9JJV9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn5aQ9JJV9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn5aQ9JJV9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Scn5aQ9JJV9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Scn5aQ9JJV9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn5aQ9JJV9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn5aQ9JJV9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
Scn5aQ9JJV9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Gm20553-201ENSMUST00000204205 844 ntBASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn5aQ9JJV9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn5aQ9JJV9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Scn5aQ9JJV9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn5aQ9JJV9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn5aQ9JJV9 Haglr-201ENSMUST00000100000 2085 ntBASIC16.25■□□□□ 0.19
Scn5aQ9JJV9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Scn5aQ9JJV9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn5aQ9JJV9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Scn5aQ9JJV9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn5aQ9JJV9 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.25■□□□□ 0.19
Scn5aQ9JJV9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn5aQ9JJV9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn5aQ9JJV9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn5aQ9JJV9 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.25■□□□□ 0.19
Scn5aQ9JJV9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn5aQ9JJV9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn5aQ9JJV9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Scn5aQ9JJV9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn5aQ9JJV9 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.25■□□□□ 0.19
Scn5aQ9JJV9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.25■□□□□ 0.19
Scn5aQ9JJV9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn5aQ9JJV9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn5aQ9JJV9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms