Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Nup50Q9JIH2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Nup50Q9JIH2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.75■□□□□ 0.27
Nup50Q9JIH2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup50Q9JIH2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nup50Q9JIH2 Gm15794-201ENSMUST00000120182 631 ntBASIC16.75■□□□□ 0.27
Nup50Q9JIH2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nup50Q9JIH2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nup50Q9JIH2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.75■□□□□ 0.27
Nup50Q9JIH2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Nup50Q9JIH2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup50Q9JIH2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Nup50Q9JIH2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nup50Q9JIH2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Nup50Q9JIH2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup50Q9JIH2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup50Q9JIH2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nup50Q9JIH2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.74■□□□□ 0.27
Nup50Q9JIH2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.74■□□□□ 0.27
Nup50Q9JIH2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nup50Q9JIH2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup50Q9JIH2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup50Q9JIH2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nup50Q9JIH2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup50Q9JIH2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.74■□□□□ 0.27
Nup50Q9JIH2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nup50Q9JIH2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nup50Q9JIH2 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.74■□□□□ 0.27
Nup50Q9JIH2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nup50Q9JIH2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup50Q9JIH2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Nup50Q9JIH2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup50Q9JIH2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup50Q9JIH2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nup50Q9JIH2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nup50Q9JIH2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.74■□□□□ 0.27
Nup50Q9JIH2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nup50Q9JIH2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nup50Q9JIH2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nup50Q9JIH2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nup50Q9JIH2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.73■□□□□ 0.27
Nup50Q9JIH2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nup50Q9JIH2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nup50Q9JIH2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Nup50Q9JIH2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nup50Q9JIH2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nup50Q9JIH2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nup50Q9JIH2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nup50Q9JIH2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nup50Q9JIH2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nup50Q9JIH2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nup50Q9JIH2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nup50Q9JIH2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Nup50Q9JIH2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Gm29518-201ENSMUST00000190858 372 ntBASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Gm17808-201ENSMUST00000200859 894 ntBASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Gm45328-201ENSMUST00000210942 917 ntBASIC16.72■□□□□ 0.27
Nup50Q9JIH2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nup50Q9JIH2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nup50Q9JIH2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nup50Q9JIH2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.71■□□□□ 0.27
Nup50Q9JIH2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nup50Q9JIH2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nup50Q9JIH2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
Nup50Q9JIH2 Gm13312-201ENSMUST00000119631 718 ntBASIC16.71■□□□□ 0.27
Nup50Q9JIH2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.71■□□□□ 0.27
Nup50Q9JIH2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nup50Q9JIH2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nup50Q9JIH2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Nup50Q9JIH2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.71■□□□□ 0.27
Nup50Q9JIH2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nup50Q9JIH2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nup50Q9JIH2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Nup50Q9JIH2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms