Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube3bQ9ES34 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube3bQ9ES34 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ube3bQ9ES34 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Ube3bQ9ES34 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ube3bQ9ES34 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Ube3bQ9ES34 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ube3bQ9ES34 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3bQ9ES34 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ube3bQ9ES34 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3bQ9ES34 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3bQ9ES34 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3bQ9ES34 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ube3bQ9ES34 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.8■□□□□ 0.6
Ube3bQ9ES34 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.8■□□□□ 0.6
Ube3bQ9ES34 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.8■□□□□ 0.6
Ube3bQ9ES34 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3bQ9ES34 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.8■□□□□ 0.6
Ube3bQ9ES34 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3bQ9ES34 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.8■□□□□ 0.6
Ube3bQ9ES34 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3bQ9ES34 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Ube3bQ9ES34 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.8■□□□□ 0.6
Ube3bQ9ES34 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3bQ9ES34 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3bQ9ES34 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3bQ9ES34 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3bQ9ES34 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3bQ9ES34 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ube3bQ9ES34 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Gm18206-201ENSMUST00000207027 926 ntBASIC18.79■□□□□ 0.6
Ube3bQ9ES34 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ube3bQ9ES34 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3bQ9ES34 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.78■□□□□ 0.6
Ube3bQ9ES34 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
Ube3bQ9ES34 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3bQ9ES34 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Ube3bQ9ES34 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3bQ9ES34 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3bQ9ES34 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.78■□□□□ 0.6
Ube3bQ9ES34 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Ube3bQ9ES34 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3bQ9ES34 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.78■□□□□ 0.6
Ube3bQ9ES34 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3bQ9ES34 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3bQ9ES34 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3bQ9ES34 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3bQ9ES34 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3bQ9ES34 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3bQ9ES34 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3bQ9ES34 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3bQ9ES34 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ube3bQ9ES34 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.77■□□□□ 0.6
Ube3bQ9ES34 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3bQ9ES34 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3bQ9ES34 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ube3bQ9ES34 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3bQ9ES34 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3bQ9ES34 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3bQ9ES34 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3bQ9ES34 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ube3bQ9ES34 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3bQ9ES34 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3bQ9ES34 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.77■□□□□ 0.6
Ube3bQ9ES34 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3bQ9ES34 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3bQ9ES34 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.77■□□□□ 0.6
Ube3bQ9ES34 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.77■□□□□ 0.6
Ube3bQ9ES34 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Ube3bQ9ES34 Gm27525-201ENSMUST00000184465 107 ntBASIC18.77■□□□□ 0.6
Ube3bQ9ES34 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.77■□□□□ 0.6
Ube3bQ9ES34 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ube3bQ9ES34 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3bQ9ES34 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ube3bQ9ES34 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ube3bQ9ES34 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms