Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Upf1Q9EPU0 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Upf1Q9EPU0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Upf1Q9EPU0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Upf1Q9EPU0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Upf1Q9EPU0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Upf1Q9EPU0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Upf1Q9EPU0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Upf1Q9EPU0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Upf1Q9EPU0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Upf1Q9EPU0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Upf1Q9EPU0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Upf1Q9EPU0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Upf1Q9EPU0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Upf1Q9EPU0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Upf1Q9EPU0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Upf1Q9EPU0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Gm22189-201ENSMUST00000103822 86 ntBASIC17.88■□□□□ 0.45
Upf1Q9EPU0 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Gm37917-201ENSMUST00000194711 392 ntBASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Upf1Q9EPU0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Gm9002-201ENSMUST00000178437 499 ntBASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.87■□□□□ 0.45
Upf1Q9EPU0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Gm5035-201ENSMUST00000215581 927 ntBASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upf1Q9EPU0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Upf1Q9EPU0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Upf1Q9EPU0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Upf1Q9EPU0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Upf1Q9EPU0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Upf1Q9EPU0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Upf1Q9EPU0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Upf1Q9EPU0 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Upf1Q9EPU0 Gm4984-201ENSMUST00000115987 360 ntBASIC17.86■□□□□ 0.45
Upf1Q9EPU0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC17.86■□□□□ 0.45
Upf1Q9EPU0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Upf1Q9EPU0 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.86■□□□□ 0.45
Upf1Q9EPU0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Upf1Q9EPU0 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Upf1Q9EPU0 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Upf1Q9EPU0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Upf1Q9EPU0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Upf1Q9EPU0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Upf1Q9EPU0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Upf1Q9EPU0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Upf1Q9EPU0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.86■□□□□ 0.45
Upf1Q9EPU0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Upf1Q9EPU0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Upf1Q9EPU0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Upf1Q9EPU0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.85■□□□□ 0.45
Upf1Q9EPU0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Upf1Q9EPU0 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC17.85■□□□□ 0.45
Upf1Q9EPU0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Upf1Q9EPU0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Upf1Q9EPU0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms