Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chmp2aQ9DB34 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chmp2aQ9DB34 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Gm17971-201ENSMUST00000190239 806 ntBASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp2aQ9DB34 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp2aQ9DB34 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp2aQ9DB34 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp2aQ9DB34 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp2aQ9DB34 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Chmp2aQ9DB34 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp2aQ9DB34 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp2aQ9DB34 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.52■□□□□ 0.24
Chmp2aQ9DB34 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp2aQ9DB34 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp2aQ9DB34 Gm12644-201ENSMUST00000119935 606 ntBASIC16.52■□□□□ 0.24
Chmp2aQ9DB34 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.52■□□□□ 0.24
Chmp2aQ9DB34 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms