Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssmem1Q9D9Y8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssmem1Q9D9Y8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ssmem1Q9D9Y8 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.69□□□□□ -0.22
Ssmem1Q9D9Y8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ssmem1Q9D9Y8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssmem1Q9D9Y8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Gm13884-201ENSMUST00000118103 829 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Gm6257-201ENSMUST00000163864 910 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Gm8825-201ENSMUST00000182565 998 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Gm4518-201ENSMUST00000182638 718 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssmem1Q9D9Y8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssmem1Q9D9Y8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssmem1Q9D9Y8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ssmem1Q9D9Y8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssmem1Q9D9Y8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ssmem1Q9D9Y8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ssmem1Q9D9Y8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssmem1Q9D9Y8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssmem1Q9D9Y8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssmem1Q9D9Y8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssmem1Q9D9Y8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ssmem1Q9D9Y8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Ssmem1Q9D9Y8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ssmem1Q9D9Y8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.66□□□□□ -0.22
Ssmem1Q9D9Y8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.66□□□□□ -0.22
Ssmem1Q9D9Y8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.66□□□□□ -0.22
Ssmem1Q9D9Y8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.66□□□□□ -0.22
Ssmem1Q9D9Y8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.66□□□□□ -0.22
Ssmem1Q9D9Y8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms