Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ShpkQ9D5J6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ShpkQ9D5J6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.27□□□□□ -0.28
ShpkQ9D5J6 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ShpkQ9D5J6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ShpkQ9D5J6 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ShpkQ9D5J6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ShpkQ9D5J6 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.27□□□□□ -0.28
ShpkQ9D5J6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ShpkQ9D5J6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ShpkQ9D5J6 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Gm7290-201ENSMUST00000104990 617 ntBASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Gm12918-201ENSMUST00000120234 636 ntBASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Gm15710-201ENSMUST00000121821 636 ntBASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShpkQ9D5J6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Gm5075-201ENSMUST00000196916 622 ntBASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShpkQ9D5J6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ShpkQ9D5J6 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ShpkQ9D5J6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms