Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3404Q9D506 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3404Q9D506 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3404Q9D506 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3404Q9D506 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3404Q9D506 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3404Q9D506 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3404Q9D506 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3404Q9D506 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Gm3404Q9D506 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Gm3404Q9D506 Gm15372-201ENSMUST00000120729 834 ntBASIC16.84■□□□□ 0.29
Gm3404Q9D506 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.84■□□□□ 0.29
Gm3404Q9D506 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3404Q9D506 Gm25745-201ENSMUST00000174945 133 ntBASIC16.84■□□□□ 0.29
Gm3404Q9D506 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3404Q9D506 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.84■□□□□ 0.29
Gm3404Q9D506 Gm17971-201ENSMUST00000190239 806 ntBASIC16.84■□□□□ 0.29
Gm3404Q9D506 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.84■□□□□ 0.29
Gm3404Q9D506 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3404Q9D506 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3404Q9D506 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Gm3404Q9D506 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3404Q9D506 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3404Q9D506 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3404Q9D506 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3404Q9D506 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3404Q9D506 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Gm3404Q9D506 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Gm3404Q9D506 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Gm3404Q9D506 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.83■□□□□ 0.29
Gm3404Q9D506 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Gm3404Q9D506 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.83■□□□□ 0.28
Gm3404Q9D506 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.83■□□□□ 0.28
Gm3404Q9D506 Mir6404-201ENSMUST00000183699 94 ntBASIC16.83■□□□□ 0.28
Gm3404Q9D506 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.83■□□□□ 0.28
Gm3404Q9D506 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.83■□□□□ 0.28
Gm3404Q9D506 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.83■□□□□ 0.28
Gm3404Q9D506 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3404Q9D506 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.83■□□□□ 0.28
Gm3404Q9D506 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3404Q9D506 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3404Q9D506 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Gm3404Q9D506 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Gm3404Q9D506 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3404Q9D506 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3404Q9D506 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.83■□□□□ 0.28
Gm3404Q9D506 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3404Q9D506 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3404Q9D506 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3404Q9D506 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3404Q9D506 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3404Q9D506 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3404Q9D506 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3404Q9D506 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3404Q9D506 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Gm3404Q9D506 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3404Q9D506 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3404Q9D506 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3404Q9D506 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3404Q9D506 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3404Q9D506 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.82■□□□□ 0.28
Gm3404Q9D506 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Gm3404Q9D506 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.82■□□□□ 0.28
Gm3404Q9D506 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.82■□□□□ 0.28
Gm3404Q9D506 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Gm3404Q9D506 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3404Q9D506 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3404Q9D506 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3404Q9D506 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Gm3404Q9D506 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.82■□□□□ 0.28
Gm3404Q9D506 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3404Q9D506 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3404Q9D506 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Gm3404Q9D506 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3404Q9D506 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3404Q9D506 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3404Q9D506 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3404Q9D506 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.81■□□□□ 0.28
Gm3404Q9D506 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3404Q9D506 Gm24589-201ENSMUST00000116692 94 ntBASIC16.81■□□□□ 0.28
Gm3404Q9D506 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.81■□□□□ 0.28
Gm3404Q9D506 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Gm3404Q9D506 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3404Q9D506 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3404Q9D506 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3404Q9D506 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3404Q9D506 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm3404Q9D506 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3404Q9D506 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3404Q9D506 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3404Q9D506 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.8■□□□□ 0.28
Gm3404Q9D506 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Gm3404Q9D506 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.8■□□□□ 0.28
Gm3404Q9D506 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3404Q9D506 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3404Q9D506 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3404Q9D506 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3404Q9D506 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3404Q9D506 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm3404Q9D506 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms