Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Chd1lQ9CXF7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.96■□□□□ 0.46
Chd1lQ9CXF7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Gm12441-201ENSMUST00000121806 588 ntBASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1lQ9CXF7 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Chd1lQ9CXF7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chd1lQ9CXF7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms