Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col25a1Q99MQ5 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Col25a1Q99MQ5 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col25a1Q99MQ5 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Col25a1Q99MQ5 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col25a1Q99MQ5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col25a1Q99MQ5 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.38■□□□□ 0.21
Col25a1Q99MQ5 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.38■□□□□ 0.21
Col25a1Q99MQ5 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
Col25a1Q99MQ5 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.38■□□□□ 0.21
Col25a1Q99MQ5 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col25a1Q99MQ5 Gm45167-201ENSMUST00000208007 322 ntBASIC16.38■□□□□ 0.21
Col25a1Q99MQ5 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col25a1Q99MQ5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.38■□□□□ 0.21
Col25a1Q99MQ5 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col25a1Q99MQ5 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col25a1Q99MQ5 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.38■□□□□ 0.21
Col25a1Q99MQ5 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col25a1Q99MQ5 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Gm18889-201ENSMUST00000174284 929 ntBASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Mir3547-201ENSMUST00000175461 88 ntBASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Col25a1Q99MQ5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col25a1Q99MQ5 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col25a1Q99MQ5 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col25a1Q99MQ5 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.36■□□□□ 0.21
Col25a1Q99MQ5 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col25a1Q99MQ5 Gm7488-201ENSMUST00000117148 684 ntBASIC16.36■□□□□ 0.21
Col25a1Q99MQ5 Gm15427-201ENSMUST00000117288 531 ntBASIC16.36■□□□□ 0.21
Col25a1Q99MQ5 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.36■□□□□ 0.21
Col25a1Q99MQ5 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.36■□□□□ 0.21
Col25a1Q99MQ5 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.36■□□□□ 0.21
Col25a1Q99MQ5 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.36■□□□□ 0.21
Col25a1Q99MQ5 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col25a1Q99MQ5 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Col25a1Q99MQ5 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.36■□□□□ 0.21
Col25a1Q99MQ5 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col25a1Q99MQ5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col25a1Q99MQ5 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col25a1Q99MQ5 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col25a1Q99MQ5 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col25a1Q99MQ5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col25a1Q99MQ5 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Mir8102-201ENSMUST00000184148 139 ntBASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.35■□□□□ 0.21
Col25a1Q99MQ5 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col25a1Q99MQ5 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col25a1Q99MQ5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col25a1Q99MQ5 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col25a1Q99MQ5 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col25a1Q99MQ5 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col25a1Q99MQ5 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms