Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx6-1Q99MA9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Gm13365-201ENSMUST00000121188 973 ntBASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx6-1Q99MA9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx6-1Q99MA9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nkx6-1Q99MA9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx6-1Q99MA9 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.81□□□□□ -0.04
Nkx6-1Q99MA9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx6-1Q99MA9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.81□□□□□ -0.04
Nkx6-1Q99MA9 Gm13597-201ENSMUST00000121239 375 ntBASIC14.81□□□□□ -0.04
Nkx6-1Q99MA9 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx6-1Q99MA9 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.81□□□□□ -0.04
Nkx6-1Q99MA9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx6-1Q99MA9 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.81□□□□□ -0.04
Nkx6-1Q99MA9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx6-1Q99MA9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx6-1Q99MA9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nkx6-1Q99MA9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx6-1Q99MA9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx6-1Q99MA9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx6-1Q99MA9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.81□□□□□ -0.04
Nkx6-1Q99MA9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx6-1Q99MA9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nkx6-1Q99MA9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.81□□□□□ -0.04
Nkx6-1Q99MA9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nkx6-1Q99MA9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Gm15358-201ENSMUST00000119249 520 ntBASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Gm9682-201ENSMUST00000197505 556 ntBASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkx6-1Q99MA9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms