Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Rfc4Q99J62 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rfc4Q99J62 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rfc4Q99J62 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rfc4Q99J62 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc4Q99J62 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc4Q99J62 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc4Q99J62 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc4Q99J62 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc4Q99J62 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc4Q99J62 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc4Q99J62 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc4Q99J62 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Rfc4Q99J62 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.2■□□□□ 0.5
Rfc4Q99J62 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc4Q99J62 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.2■□□□□ 0.5
Rfc4Q99J62 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc4Q99J62 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc4Q99J62 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.2■□□□□ 0.5
Rfc4Q99J62 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rfc4Q99J62 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc4Q99J62 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc4Q99J62 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc4Q99J62 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Rfc4Q99J62 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rfc4Q99J62 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc4Q99J62 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfc4Q99J62 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc4Q99J62 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.19■□□□□ 0.5
Rfc4Q99J62 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc4Q99J62 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc4Q99J62 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc4Q99J62 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc4Q99J62 Gm14057-201ENSMUST00000120631 482 ntBASIC18.19■□□□□ 0.5
Rfc4Q99J62 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc4Q99J62 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.19■□□□□ 0.5
Rfc4Q99J62 Gm44492-201ENSMUST00000197012 141 ntBASIC18.19■□□□□ 0.5
Rfc4Q99J62 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.19■□□□□ 0.5
Rfc4Q99J62 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc4Q99J62 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc4Q99J62 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.19■□□□□ 0.5
Rfc4Q99J62 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc4Q99J62 Gm8396-201ENSMUST00000057361 823 ntBASIC18.19■□□□□ 0.5
Rfc4Q99J62 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc4Q99J62 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc4Q99J62 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc4Q99J62 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc4Q99J62 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc4Q99J62 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc4Q99J62 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc4Q99J62 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc4Q99J62 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc4Q99J62 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfc4Q99J62 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rfc4Q99J62 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.18■□□□□ 0.5
Rfc4Q99J62 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Rfc4Q99J62 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rfc4Q99J62 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rfc4Q99J62 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.18■□□□□ 0.5
Rfc4Q99J62 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rfc4Q99J62 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfc4Q99J62 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.18■□□□□ 0.5
Rfc4Q99J62 Gm44872-201ENSMUST00000207864 420 ntBASIC18.18■□□□□ 0.5
Rfc4Q99J62 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms