Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Gm7153-201ENSMUST00000117092 455 ntBASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha3Q91Y16 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha3Q91Y16 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdha3Q91Y16 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Gm15165-201ENSMUST00000118140 502 ntBASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdha3Q91Y16 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms