Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb3Q91XZ7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb3Q91XZ7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.87■□□□□ 0.13
Pcdhb3Q91XZ7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms