Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb4Q91XZ6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb4Q91XZ6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb4Q91XZ6 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb4Q91XZ6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb4Q91XZ6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb4Q91XZ6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Pcdhb4Q91XZ6 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb4Q91XZ6 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb4Q91XZ6 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb4Q91XZ6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdhb4Q91XZ6 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb4Q91XZ6 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb4Q91XZ6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb4Q91XZ6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb4Q91XZ6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhb4Q91XZ6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhb4Q91XZ6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhb4Q91XZ6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhb4Q91XZ6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhb4Q91XZ6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.77■□□□□ 0.12
Pcdhb4Q91XZ6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb4Q91XZ6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb4Q91XZ6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb4Q91XZ6 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.77■□□□□ 0.11
Pcdhb4Q91XZ6 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
Pcdhb4Q91XZ6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Pcdhb4Q91XZ6 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Pcdhb4Q91XZ6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb4Q91XZ6 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb4Q91XZ6 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Gm10013-201ENSMUST00000106074 672 ntBASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhb4Q91XZ6 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Gm10231-201ENSMUST00000181584 441 ntBASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Gm10175-202ENSMUST00000208752 441 ntBASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdhb4Q91XZ6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms