Protein–RNA interactions for Protein: Q91WM3

Rrp9, U3 small nucleolar RNA-interacting protein 2, mousemouse

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp9Q91WM3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
Rrp9Q91WM3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rrp9Q91WM3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rrp9Q91WM3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rrp9Q91WM3 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.4■□□□□ 0.38
Rrp9Q91WM3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rrp9Q91WM3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.4■□□□□ 0.38
Rrp9Q91WM3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rrp9Q91WM3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rrp9Q91WM3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rrp9Q91WM3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rrp9Q91WM3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rrp9Q91WM3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rrp9Q91WM3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rrp9Q91WM3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rrp9Q91WM3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rrp9Q91WM3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rrp9Q91WM3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rrp9Q91WM3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Rrp9Q91WM3 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rrp9Q91WM3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rrp9Q91WM3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rrp9Q91WM3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rrp9Q91WM3 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rrp9Q91WM3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rrp9Q91WM3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rrp9Q91WM3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.39■□□□□ 0.37
Rrp9Q91WM3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rrp9Q91WM3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rrp9Q91WM3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rrp9Q91WM3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rrp9Q91WM3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rrp9Q91WM3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rrp9Q91WM3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rrp9Q91WM3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rrp9Q91WM3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rrp9Q91WM3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Gm43677-201ENSMUST00000198098 2378 ntBASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Gm6198-201ENSMUST00000191337 2929 ntBASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rrp9Q91WM3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rrp9Q91WM3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rrp9Q91WM3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Rrp9Q91WM3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rrp9Q91WM3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rrp9Q91WM3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rrp9Q91WM3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rrp9Q91WM3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rrp9Q91WM3 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rrp9Q91WM3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rrp9Q91WM3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rrp9Q91WM3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.37■□□□□ 0.37
Rrp9Q91WM3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.37■□□□□ 0.37
Rrp9Q91WM3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rrp9Q91WM3 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rrp9Q91WM3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms