Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TraipQ8VIG6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TraipQ8VIG6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TraipQ8VIG6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TraipQ8VIG6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TraipQ8VIG6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TraipQ8VIG6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TraipQ8VIG6 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.82■□□□□ 0.28
TraipQ8VIG6 Gm14494-201ENSMUST00000118786 435 ntBASIC16.82■□□□□ 0.28
TraipQ8VIG6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.82■□□□□ 0.28
TraipQ8VIG6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.82■□□□□ 0.28
TraipQ8VIG6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.82■□□□□ 0.28
TraipQ8VIG6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TraipQ8VIG6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TraipQ8VIG6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.82■□□□□ 0.28
TraipQ8VIG6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TraipQ8VIG6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TraipQ8VIG6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TraipQ8VIG6 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.81■□□□□ 0.28
TraipQ8VIG6 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TraipQ8VIG6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TraipQ8VIG6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TraipQ8VIG6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TraipQ8VIG6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
TraipQ8VIG6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TraipQ8VIG6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TraipQ8VIG6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TraipQ8VIG6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TraipQ8VIG6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.81■□□□□ 0.28
TraipQ8VIG6 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TraipQ8VIG6 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TraipQ8VIG6 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TraipQ8VIG6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TraipQ8VIG6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TraipQ8VIG6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TraipQ8VIG6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TraipQ8VIG6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
TraipQ8VIG6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TraipQ8VIG6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.81■□□□□ 0.28
TraipQ8VIG6 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TraipQ8VIG6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Gm12260-201ENSMUST00000122447 411 ntBASIC16.8■□□□□ 0.28
TraipQ8VIG6 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.8■□□□□ 0.28
TraipQ8VIG6 Gm2756-201ENSMUST00000195851 400 ntBASIC16.8■□□□□ 0.28
TraipQ8VIG6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TraipQ8VIG6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TraipQ8VIG6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.79■□□□□ 0.28
TraipQ8VIG6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Gm9682-201ENSMUST00000197505 556 ntBASIC16.79■□□□□ 0.28
TraipQ8VIG6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Gm45167-201ENSMUST00000208007 322 ntBASIC16.79■□□□□ 0.28
TraipQ8VIG6 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TraipQ8VIG6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TraipQ8VIG6 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms