Protein–RNA interactions for Protein: Q8VIG3

Rsph1, Radial spoke head 1 homolog, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph1Q8VIG3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rsph1Q8VIG3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rsph1Q8VIG3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rsph1Q8VIG3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rsph1Q8VIG3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rsph1Q8VIG3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rsph1Q8VIG3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rsph1Q8VIG3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rsph1Q8VIG3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rsph1Q8VIG3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Rsph1Q8VIG3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rsph1Q8VIG3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rsph1Q8VIG3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rsph1Q8VIG3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Rsph1Q8VIG3 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.52■□□□□ 0.24
Rsph1Q8VIG3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.52■□□□□ 0.24
Rsph1Q8VIG3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rsph1Q8VIG3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rsph1Q8VIG3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rsph1Q8VIG3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rsph1Q8VIG3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rsph1Q8VIG3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.52■□□□□ 0.24
Rsph1Q8VIG3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Rsph1Q8VIG3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rsph1Q8VIG3 Gm45167-201ENSMUST00000208007 322 ntBASIC16.52■□□□□ 0.24
Rsph1Q8VIG3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.52■□□□□ 0.24
Rsph1Q8VIG3 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.52■□□□□ 0.24
Rsph1Q8VIG3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rsph1Q8VIG3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rsph1Q8VIG3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rsph1Q8VIG3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rsph1Q8VIG3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rsph1Q8VIG3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rsph1Q8VIG3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Rsph1Q8VIG3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
Rsph1Q8VIG3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rsph1Q8VIG3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rsph1Q8VIG3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Rsph1Q8VIG3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Gm25911-201ENSMUST00000157621 56 ntBASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rsph1Q8VIG3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 Gm14822-201ENSMUST00000122247 291 ntBASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 Gm27300-201ENSMUST00000184085 97 ntBASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 Gm27335-201ENSMUST00000184758 97 ntBASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rsph1Q8VIG3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Rsph1Q8VIG3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.49■□□□□ 0.23
Rsph1Q8VIG3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rsph1Q8VIG3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rsph1Q8VIG3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rsph1Q8VIG3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rsph1Q8VIG3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rsph1Q8VIG3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms