Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Odf4Q8VI88 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Odf4Q8VI88 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Odf4Q8VI88 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Odf4Q8VI88 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Odf4Q8VI88 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Odf4Q8VI88 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Odf4Q8VI88 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Odf4Q8VI88 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Odf4Q8VI88 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Odf4Q8VI88 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Odf4Q8VI88 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Odf4Q8VI88 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Odf4Q8VI88 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.21□□□□□ -0.13
Odf4Q8VI88 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Odf4Q8VI88 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Odf4Q8VI88 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Odf4Q8VI88 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Odf4Q8VI88 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Odf4Q8VI88 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Odf4Q8VI88 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Odf4Q8VI88 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Odf4Q8VI88 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Odf4Q8VI88 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Odf4Q8VI88 Mir3081-201ENSMUST00000175305 84 ntBASIC14.21□□□□□ -0.13
Odf4Q8VI88 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Odf4Q8VI88 Gm45328-201ENSMUST00000210942 917 ntBASIC14.21□□□□□ -0.13
Odf4Q8VI88 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.21□□□□□ -0.13
Odf4Q8VI88 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Odf4Q8VI88 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Odf4Q8VI88 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Odf4Q8VI88 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Odf4Q8VI88 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Odf4Q8VI88 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Odf4Q8VI88 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Odf4Q8VI88 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Odf4Q8VI88 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Odf4Q8VI88 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Odf4Q8VI88 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Odf4Q8VI88 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Gm27742-201ENSMUST00000184667 60 ntBASIC14.2□□□□□ -0.14
Odf4Q8VI88 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Odf4Q8VI88 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Odf4Q8VI88 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.19□□□□□ -0.14
Odf4Q8VI88 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Gm7461-201ENSMUST00000058918 827 ntBASIC14.19□□□□□ -0.14
Odf4Q8VI88 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Odf4Q8VI88 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 6.2 ms