Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rprd1aQ8VDS4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Mir8098-201ENSMUST00000184011 137 ntBASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Gm28659-201ENSMUST00000188013 759 ntBASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Gm5864-201ENSMUST00000202263 970 ntBASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rprd1aQ8VDS4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Gm4459-201ENSMUST00000118750 468 ntBASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Gm12497-201ENSMUST00000138778 237 ntBASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Gm7461-201ENSMUST00000058918 827 ntBASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rprd1aQ8VDS4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rprd1aQ8VDS4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rprd1aQ8VDS4 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rprd1aQ8VDS4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rprd1aQ8VDS4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Rprd1aQ8VDS4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.27■□□□□ 0.2
Rprd1aQ8VDS4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.27■□□□□ 0.2
Rprd1aQ8VDS4 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rprd1aQ8VDS4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.27■□□□□ 0.2
Rprd1aQ8VDS4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rprd1aQ8VDS4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rprd1aQ8VDS4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rprd1aQ8VDS4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rprd1aQ8VDS4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rprd1aQ8VDS4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Rprd1aQ8VDS4 Gm11452-201ENSMUST00000122376 690 ntBASIC16.27■□□□□ 0.2
Rprd1aQ8VDS4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.27■□□□□ 0.2
Rprd1aQ8VDS4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.27■□□□□ 0.2
Rprd1aQ8VDS4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rprd1aQ8VDS4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Rprd1aQ8VDS4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Rprd1aQ8VDS4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rprd1aQ8VDS4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.27■□□□□ 0.19
Rprd1aQ8VDS4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Rprd1aQ8VDS4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rprd1aQ8VDS4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rprd1aQ8VDS4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Rprd1aQ8VDS4 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rprd1aQ8VDS4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rprd1aQ8VDS4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Rprd1aQ8VDS4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rprd1aQ8VDS4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rprd1aQ8VDS4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rprd1aQ8VDS4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Rprd1aQ8VDS4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Rprd1aQ8VDS4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rprd1aQ8VDS4 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rprd1aQ8VDS4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rprd1aQ8VDS4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms