Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc9Q8VC31 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccdc9Q8VC31 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ccdc9Q8VC31 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc9Q8VC31 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccdc9Q8VC31 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc9Q8VC31 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc9Q8VC31 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc9Q8VC31 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc9Q8VC31 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc9Q8VC31 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc9Q8VC31 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc9Q8VC31 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc9Q8VC31 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc9Q8VC31 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc9Q8VC31 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc9Q8VC31 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc9Q8VC31 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc9Q8VC31 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc9Q8VC31 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Gm6211-202ENSMUST00000167849 925 ntBASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Gm37179-201ENSMUST00000194862 823 ntBASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc9Q8VC31 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc9Q8VC31 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc9Q8VC31 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc9Q8VC31 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc9Q8VC31 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc9Q8VC31 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc9Q8VC31 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc9Q8VC31 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc9Q8VC31 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.14■□□□□ 0.65
Ccdc9Q8VC31 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc9Q8VC31 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC19.14■□□□□ 0.65
Ccdc9Q8VC31 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.14■□□□□ 0.65
Ccdc9Q8VC31 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.14■□□□□ 0.65
Ccdc9Q8VC31 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc9Q8VC31 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc9Q8VC31 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc9Q8VC31 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc9Q8VC31 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc9Q8VC31 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc9Q8VC31 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.14■□□□□ 0.65
Ccdc9Q8VC31 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc9Q8VC31 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc9Q8VC31 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc9Q8VC31 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Gm5357-201ENSMUST00000212720 1924 ntBASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Gm10605-202ENSMUST00000183019 3198 ntBASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc9Q8VC31 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms