Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cuedc1Q8R3V6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cuedc1Q8R3V6 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cuedc1Q8R3V6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cuedc1Q8R3V6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cuedc1Q8R3V6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cuedc1Q8R3V6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Gm13216-201ENSMUST00000117145 591 ntBASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Gm27867-201ENSMUST00000184778 125 ntBASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Psmb5-202ENSMUST00000227257 622 ntBASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cuedc1Q8R3V6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cuedc1Q8R3V6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 Gm43575-201ENSMUST00000196420 516 ntBASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 Gm18421-201ENSMUST00000204122 625 ntBASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 Gm44487-201ENSMUST00000205145 325 ntBASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cuedc1Q8R3V6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms