Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.33■□□□□ 0.36
Sox30Q8CGW4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Sox30Q8CGW4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox30Q8CGW4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sox30Q8CGW4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox30Q8CGW4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Sox30Q8CGW4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox30Q8CGW4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox30Q8CGW4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox30Q8CGW4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox30Q8CGW4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sox30Q8CGW4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox30Q8CGW4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sox30Q8CGW4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sox30Q8CGW4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
Sox30Q8CGW4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox30Q8CGW4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.32■□□□□ 0.36
Sox30Q8CGW4 Gm18032-201ENSMUST00000222541 538 ntBASIC17.32■□□□□ 0.36
Sox30Q8CGW4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox30Q8CGW4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox30Q8CGW4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Sox30Q8CGW4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox30Q8CGW4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Sox30Q8CGW4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox30Q8CGW4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox30Q8CGW4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox30Q8CGW4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox30Q8CGW4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox30Q8CGW4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Sox30Q8CGW4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox30Q8CGW4 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox30Q8CGW4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox30Q8CGW4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox30Q8CGW4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox30Q8CGW4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sox30Q8CGW4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Sox30Q8CGW4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox30Q8CGW4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sox30Q8CGW4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.31■□□□□ 0.36
Sox30Q8CGW4 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.31■□□□□ 0.36
Sox30Q8CGW4 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.31■□□□□ 0.36
Sox30Q8CGW4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.31■□□□□ 0.36
Sox30Q8CGW4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox30Q8CGW4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox30Q8CGW4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Sox30Q8CGW4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox30Q8CGW4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox30Q8CGW4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox30Q8CGW4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Sox30Q8CGW4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sox30Q8CGW4 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.3■□□□□ 0.36
Sox30Q8CGW4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Sox30Q8CGW4 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox30Q8CGW4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox30Q8CGW4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sox30Q8CGW4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Sox30Q8CGW4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sox30Q8CGW4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sox30Q8CGW4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.3■□□□□ 0.36
Sox30Q8CGW4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Sox30Q8CGW4 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.3■□□□□ 0.36
Sox30Q8CGW4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox30Q8CGW4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox30Q8CGW4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sox30Q8CGW4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sox30Q8CGW4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox30Q8CGW4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox30Q8CGW4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Gm22697-201ENSMUST00000175194 63 ntBASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sox30Q8CGW4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.28■□□□□ 0.36
Sox30Q8CGW4 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sox30Q8CGW4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox30Q8CGW4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox30Q8CGW4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox30Q8CGW4 Mir770-201ENSMUST00000103252 94 ntBASIC17.28■□□□□ 0.36
Sox30Q8CGW4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.28■□□□□ 0.36
Sox30Q8CGW4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox30Q8CGW4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
Sox30Q8CGW4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms