Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
Rp1l1Q8CGM2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rp1l1Q8CGM2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rp1l1Q8CGM2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rp1l1Q8CGM2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rp1l1Q8CGM2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rp1l1Q8CGM2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Rp1l1Q8CGM2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rp1l1Q8CGM2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rp1l1Q8CGM2 Gm13015-201ENSMUST00000118674 204 ntBASIC16.34■□□□□ 0.21
Rp1l1Q8CGM2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rp1l1Q8CGM2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Rp1l1Q8CGM2 Gm8318-201ENSMUST00000182954 872 ntBASIC16.34■□□□□ 0.21
Rp1l1Q8CGM2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rp1l1Q8CGM2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rp1l1Q8CGM2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rp1l1Q8CGM2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rp1l1Q8CGM2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
Rp1l1Q8CGM2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rp1l1Q8CGM2 Gm14719-201ENSMUST00000121891 340 ntBASIC16.33■□□□□ 0.21
Rp1l1Q8CGM2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rp1l1Q8CGM2 Gm2272-201ENSMUST00000194903 582 ntBASIC16.33■□□□□ 0.21
Rp1l1Q8CGM2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rp1l1Q8CGM2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rp1l1Q8CGM2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rp1l1Q8CGM2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rp1l1Q8CGM2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rp1l1Q8CGM2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rp1l1Q8CGM2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.33■□□□□ 0.2
Rp1l1Q8CGM2 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rp1l1Q8CGM2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rp1l1Q8CGM2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rp1l1Q8CGM2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rp1l1Q8CGM2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rp1l1Q8CGM2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rp1l1Q8CGM2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rp1l1Q8CGM2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rp1l1Q8CGM2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rp1l1Q8CGM2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rp1l1Q8CGM2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rp1l1Q8CGM2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.32■□□□□ 0.2
Rp1l1Q8CGM2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rp1l1Q8CGM2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.32■□□□□ 0.2
Rp1l1Q8CGM2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rp1l1Q8CGM2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.32■□□□□ 0.2
Rp1l1Q8CGM2 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rp1l1Q8CGM2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rp1l1Q8CGM2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rp1l1Q8CGM2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rp1l1Q8CGM2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Rp1l1Q8CGM2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rp1l1Q8CGM2 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rp1l1Q8CGM2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Rp1l1Q8CGM2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Gm28630-201ENSMUST00000187806 498 ntBASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Gm7488-201ENSMUST00000117148 684 ntBASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.31■□□□□ 0.2
Rp1l1Q8CGM2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.3■□□□□ 0.2
Rp1l1Q8CGM2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Rp1l1Q8CGM2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rp1l1Q8CGM2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rp1l1Q8CGM2 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.3■□□□□ 0.2
Rp1l1Q8CGM2 Mir8102-201ENSMUST00000184148 139 ntBASIC16.3■□□□□ 0.2
Rp1l1Q8CGM2 Gm27680-201ENSMUST00000184192 160 ntBASIC16.3■□□□□ 0.2
Rp1l1Q8CGM2 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.3■□□□□ 0.2
Rp1l1Q8CGM2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.3■□□□□ 0.2
Rp1l1Q8CGM2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rp1l1Q8CGM2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.3■□□□□ 0.2
Rp1l1Q8CGM2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rp1l1Q8CGM2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Gm10499-201ENSMUST00000174094 934 ntBASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms