Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.71■□□□□ 0.59
Rbm28Q8CGC6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.71■□□□□ 0.59
Rbm28Q8CGC6 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rbm28Q8CGC6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rbm28Q8CGC6 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.71■□□□□ 0.58
Rbm28Q8CGC6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rbm28Q8CGC6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rbm28Q8CGC6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rbm28Q8CGC6 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Rbm28Q8CGC6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rbm28Q8CGC6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.7■□□□□ 0.58
Rbm28Q8CGC6 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.7■□□□□ 0.58
Rbm28Q8CGC6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.7■□□□□ 0.58
Rbm28Q8CGC6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rbm28Q8CGC6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rbm28Q8CGC6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rbm28Q8CGC6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rbm28Q8CGC6 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Rbm28Q8CGC6 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.7■□□□□ 0.58
Rbm28Q8CGC6 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.7■□□□□ 0.58
Rbm28Q8CGC6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rbm28Q8CGC6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rbm28Q8CGC6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Rbm28Q8CGC6 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rbm28Q8CGC6 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rbm28Q8CGC6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rbm28Q8CGC6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Gm15173-201ENSMUST00000122049 433 ntBASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Mir6404-201ENSMUST00000183699 94 ntBASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Gm8655-201ENSMUST00000221159 852 ntBASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.68■□□□□ 0.58
Rbm28Q8CGC6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rbm28Q8CGC6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rbm28Q8CGC6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rbm28Q8CGC6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.67■□□□□ 0.58
Rbm28Q8CGC6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rbm28Q8CGC6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rbm28Q8CGC6 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.67■□□□□ 0.58
Rbm28Q8CGC6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rbm28Q8CGC6 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rbm28Q8CGC6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rbm28Q8CGC6 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rbm28Q8CGC6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.67■□□□□ 0.58
Rbm28Q8CGC6 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.67■□□□□ 0.58
Rbm28Q8CGC6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rbm28Q8CGC6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.67■□□□□ 0.58
Rbm28Q8CGC6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms