Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Shisa4Q8CA71 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shisa4Q8CA71 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shisa4Q8CA71 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shisa4Q8CA71 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shisa4Q8CA71 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shisa4Q8CA71 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
Shisa4Q8CA71 Gm7063-201ENSMUST00000186840 981 ntBASIC18.36■□□□□ 0.53
Shisa4Q8CA71 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shisa4Q8CA71 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shisa4Q8CA71 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
Shisa4Q8CA71 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shisa4Q8CA71 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shisa4Q8CA71 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shisa4Q8CA71 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa4Q8CA71 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Shisa4Q8CA71 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.35■□□□□ 0.53
Shisa4Q8CA71 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa4Q8CA71 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Shisa4Q8CA71 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa4Q8CA71 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.35■□□□□ 0.53
Shisa4Q8CA71 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa4Q8CA71 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa4Q8CA71 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Shisa4Q8CA71 Gm11594-201ENSMUST00000122313 162 ntBASIC18.35■□□□□ 0.53
Shisa4Q8CA71 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa4Q8CA71 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Shisa4Q8CA71 Mir5131-201ENSMUST00000175426 93 ntBASIC18.35■□□□□ 0.53
Shisa4Q8CA71 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.35■□□□□ 0.53
Shisa4Q8CA71 Gm8000-201ENSMUST00000188378 592 ntBASIC18.35■□□□□ 0.53
Shisa4Q8CA71 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa4Q8CA71 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.35■□□□□ 0.53
Shisa4Q8CA71 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa4Q8CA71 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shisa4Q8CA71 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Shisa4Q8CA71 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shisa4Q8CA71 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shisa4Q8CA71 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shisa4Q8CA71 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.34■□□□□ 0.53
Shisa4Q8CA71 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shisa4Q8CA71 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Shisa4Q8CA71 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shisa4Q8CA71 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shisa4Q8CA71 Gm15358-201ENSMUST00000119249 520 ntBASIC18.34■□□□□ 0.53
Shisa4Q8CA71 Gm15173-201ENSMUST00000122049 433 ntBASIC18.34■□□□□ 0.53
Shisa4Q8CA71 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Shisa4Q8CA71 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shisa4Q8CA71 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shisa4Q8CA71 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shisa4Q8CA71 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shisa4Q8CA71 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.34■□□□□ 0.53
Shisa4Q8CA71 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Shisa4Q8CA71 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Shisa4Q8CA71 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.34■□□□□ 0.53
Shisa4Q8CA71 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.34■□□□□ 0.53
Shisa4Q8CA71 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Shisa4Q8CA71 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Shisa4Q8CA71 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Shisa4Q8CA71 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shisa4Q8CA71 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shisa4Q8CA71 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
Shisa4Q8CA71 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.33■□□□□ 0.53
Shisa4Q8CA71 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shisa4Q8CA71 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shisa4Q8CA71 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Shisa4Q8CA71 Gm12350-201ENSMUST00000121208 462 ntBASIC18.33■□□□□ 0.52
Shisa4Q8CA71 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.33■□□□□ 0.52
Shisa4Q8CA71 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.33■□□□□ 0.52
Shisa4Q8CA71 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.33■□□□□ 0.52
Shisa4Q8CA71 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.33■□□□□ 0.52
Shisa4Q8CA71 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shisa4Q8CA71 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shisa4Q8CA71 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shisa4Q8CA71 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shisa4Q8CA71 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shisa4Q8CA71 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shisa4Q8CA71 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shisa4Q8CA71 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Shisa4Q8CA71 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shisa4Q8CA71 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shisa4Q8CA71 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Shisa4Q8CA71 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Shisa4Q8CA71 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Shisa4Q8CA71 Gm8344-201ENSMUST00000119813 856 ntBASIC18.32■□□□□ 0.52
Shisa4Q8CA71 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Shisa4Q8CA71 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.32■□□□□ 0.52
Shisa4Q8CA71 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Shisa4Q8CA71 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.32■□□□□ 0.52
Shisa4Q8CA71 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shisa4Q8CA71 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shisa4Q8CA71 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Shisa4Q8CA71 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.32■□□□□ 0.52
Shisa4Q8CA71 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shisa4Q8CA71 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shisa4Q8CA71 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shisa4Q8CA71 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shisa4Q8CA71 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms