Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp20Q8C6M1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp20Q8C6M1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.5■□□□□ 0.39
Usp20Q8C6M1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp20Q8C6M1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp20Q8C6M1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp20Q8C6M1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Usp20Q8C6M1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.5■□□□□ 0.39
Usp20Q8C6M1 Gm7222-201ENSMUST00000117512 906 ntBASIC17.5■□□□□ 0.39
Usp20Q8C6M1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp20Q8C6M1 Gm14494-201ENSMUST00000118786 435 ntBASIC17.5■□□□□ 0.39
Usp20Q8C6M1 Gm27646-201ENSMUST00000183989 110 ntBASIC17.5■□□□□ 0.39
Usp20Q8C6M1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp20Q8C6M1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp20Q8C6M1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp20Q8C6M1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp20Q8C6M1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp20Q8C6M1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp20Q8C6M1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp20Q8C6M1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp20Q8C6M1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp20Q8C6M1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp20Q8C6M1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp20Q8C6M1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Usp20Q8C6M1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp20Q8C6M1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp20Q8C6M1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Usp20Q8C6M1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp20Q8C6M1 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp20Q8C6M1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Usp20Q8C6M1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp20Q8C6M1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.49■□□□□ 0.39
Usp20Q8C6M1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.49■□□□□ 0.39
Usp20Q8C6M1 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.49■□□□□ 0.39
Usp20Q8C6M1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp20Q8C6M1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.49■□□□□ 0.39
Usp20Q8C6M1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp20Q8C6M1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Usp20Q8C6M1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp20Q8C6M1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Usp20Q8C6M1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp20Q8C6M1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp20Q8C6M1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp20Q8C6M1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp20Q8C6M1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Usp20Q8C6M1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp20Q8C6M1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp20Q8C6M1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp20Q8C6M1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp20Q8C6M1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp20Q8C6M1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.47■□□□□ 0.39
Usp20Q8C6M1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Usp20Q8C6M1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp20Q8C6M1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Usp20Q8C6M1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp20Q8C6M1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp20Q8C6M1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Usp20Q8C6M1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Usp20Q8C6M1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp20Q8C6M1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp20Q8C6M1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp20Q8C6M1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp20Q8C6M1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.47■□□□□ 0.39
Usp20Q8C6M1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.47■□□□□ 0.39
Usp20Q8C6M1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp20Q8C6M1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.47■□□□□ 0.39
Usp20Q8C6M1 Gm9727-201ENSMUST00000161387 555 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms