Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a6Q8C6K9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a6Q8C6K9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Col6a6Q8C6K9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Col6a6Q8C6K9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Gm43474-201ENSMUST00000196415 774 ntBASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col6a6Q8C6K9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.24□□□□□ -0.13
Col6a6Q8C6K9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a6Q8C6K9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a6Q8C6K9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Col6a6Q8C6K9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a6Q8C6K9 Gm9385-201ENSMUST00000117563 472 ntBASIC14.24□□□□□ -0.13
Col6a6Q8C6K9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col6a6Q8C6K9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a6Q8C6K9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a6Q8C6K9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a6Q8C6K9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a6Q8C6K9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a6Q8C6K9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a6Q8C6K9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a6Q8C6K9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Col6a6Q8C6K9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col6a6Q8C6K9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Mir6977-201ENSMUST00000184960 64 ntBASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms