Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Gm23935-201ENSMUST00000102303 57 ntBASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Gm24270-201ENSMUST00000102326 57 ntBASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Gm24245-201ENSMUST00000157318 57 ntBASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rd3Q8BRE0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.77■□□□□ 0.28
Rd3Q8BRE0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rd3Q8BRE0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rd3Q8BRE0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rd3Q8BRE0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rd3Q8BRE0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rd3Q8BRE0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rd3Q8BRE0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rd3Q8BRE0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rd3Q8BRE0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Rd3Q8BRE0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rd3Q8BRE0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rd3Q8BRE0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.77■□□□□ 0.28
Rd3Q8BRE0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rd3Q8BRE0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rd3Q8BRE0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.77■□□□□ 0.28
Rd3Q8BRE0 Gm45167-201ENSMUST00000208007 322 ntBASIC16.77■□□□□ 0.28
Rd3Q8BRE0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.77■□□□□ 0.28
Rd3Q8BRE0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.28
Rd3Q8BRE0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rd3Q8BRE0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rd3Q8BRE0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rd3Q8BRE0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Rd3Q8BRE0 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rd3Q8BRE0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rd3Q8BRE0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rd3Q8BRE0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rd3Q8BRE0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rd3Q8BRE0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rd3Q8BRE0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.76■□□□□ 0.27
Rd3Q8BRE0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.76■□□□□ 0.27
Rd3Q8BRE0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rd3Q8BRE0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.76■□□□□ 0.27
Rd3Q8BRE0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rd3Q8BRE0 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.76■□□□□ 0.27
Rd3Q8BRE0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.76■□□□□ 0.27
Rd3Q8BRE0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.76■□□□□ 0.27
Rd3Q8BRE0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rd3Q8BRE0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms