Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smg1Q8BKX6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smg1Q8BKX6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.33□□□□□ -0.28
Smg1Q8BKX6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smg1Q8BKX6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smg1Q8BKX6 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.33□□□□□ -0.28
Smg1Q8BKX6 Thap2-203ENSMUST00000218989 527 ntBASIC13.33□□□□□ -0.28
Smg1Q8BKX6 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Smg1Q8BKX6 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smg1Q8BKX6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smg1Q8BKX6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Mir7684-201ENSMUST00000183858 60 ntBASIC13.31□□□□□ -0.28
Smg1Q8BKX6 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Gm7730-201ENSMUST00000212486 454 ntBASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Gm27989-201ENSMUST00000184721 107 ntBASIC13.31□□□□□ -0.28
Smg1Q8BKX6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Smg1Q8BKX6 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smg1Q8BKX6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smg1Q8BKX6 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.3□□□□□ -0.28
Smg1Q8BKX6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smg1Q8BKX6 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smg1Q8BKX6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.3□□□□□ -0.28
Smg1Q8BKX6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smg1Q8BKX6 Mir1938-201ENSMUST00000158746 100 ntBASIC13.3□□□□□ -0.28
Smg1Q8BKX6 Rpph1-201ENSMUST00000175096 319 ntBASIC13.3□□□□□ -0.28
Smg1Q8BKX6 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.3□□□□□ -0.28
Smg1Q8BKX6 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smg1Q8BKX6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smg1Q8BKX6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smg1Q8BKX6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms