Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf38Q8BI21 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf38Q8BI21 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf38Q8BI21 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf38Q8BI21 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf38Q8BI21 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf38Q8BI21 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Rnf38Q8BI21 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf38Q8BI21 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf38Q8BI21 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf38Q8BI21 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Gm10231-201ENSMUST00000181584 441 ntBASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Gm10175-202ENSMUST00000208752 441 ntBASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf38Q8BI21 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf38Q8BI21 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Gm37722-201ENSMUST00000193757 208 ntBASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.31■□□□□ 0.04
Rnf38Q8BI21 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms