Protein–RNA interactions for Protein: Q8BGJ9

U2af1l4, Splicing factor U2AF 26 kDa subunit, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1l4Q8BGJ9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
U2af1l4Q8BGJ9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Gm44357-201ENSMUST00000195897 142 ntBASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Gm19658-201ENSMUST00000196231 138 ntBASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Gm44367-201ENSMUST00000196836 138 ntBASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Gm44350-201ENSMUST00000197197 138 ntBASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Gm44390-201ENSMUST00000197533 144 ntBASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Gm44313-201ENSMUST00000198018 138 ntBASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Gm44486-201ENSMUST00000198508 138 ntBASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Gm44454-201ENSMUST00000198541 138 ntBASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Gm44314-201ENSMUST00000199263 138 ntBASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Gm44394-201ENSMUST00000199558 138 ntBASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Gm44484-201ENSMUST00000199873 138 ntBASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Gm44466-201ENSMUST00000200264 138 ntBASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Gm44359-201ENSMUST00000200671 138 ntBASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1l4Q8BGJ9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1l4Q8BGJ9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1l4Q8BGJ9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1l4Q8BGJ9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1l4Q8BGJ9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1l4Q8BGJ9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1l4Q8BGJ9 Rprl3-201ENSMUST00000157400 290 ntBASIC18.65■□□□□ 0.58
U2af1l4Q8BGJ9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.65■□□□□ 0.58
U2af1l4Q8BGJ9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.65■□□□□ 0.58
U2af1l4Q8BGJ9 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.65■□□□□ 0.58
U2af1l4Q8BGJ9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1l4Q8BGJ9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1l4Q8BGJ9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.65■□□□□ 0.58
U2af1l4Q8BGJ9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1l4Q8BGJ9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1l4Q8BGJ9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1l4Q8BGJ9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1l4Q8BGJ9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
U2af1l4Q8BGJ9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1l4Q8BGJ9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1l4Q8BGJ9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1l4Q8BGJ9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1l4Q8BGJ9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
U2af1l4Q8BGJ9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
U2af1l4Q8BGJ9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
U2af1l4Q8BGJ9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1l4Q8BGJ9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1l4Q8BGJ9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1l4Q8BGJ9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
U2af1l4Q8BGJ9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
U2af1l4Q8BGJ9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1l4Q8BGJ9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
U2af1l4Q8BGJ9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1l4Q8BGJ9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1l4Q8BGJ9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.64■□□□□ 0.57
U2af1l4Q8BGJ9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1l4Q8BGJ9 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.64■□□□□ 0.57
U2af1l4Q8BGJ9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1l4Q8BGJ9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1l4Q8BGJ9 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.64■□□□□ 0.57
U2af1l4Q8BGJ9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
U2af1l4Q8BGJ9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
U2af1l4Q8BGJ9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
U2af1l4Q8BGJ9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
U2af1l4Q8BGJ9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms