Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim65Q8BFW4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trim65Q8BFW4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim65Q8BFW4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim65Q8BFW4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.01■□□□□ 0.31
Trim65Q8BFW4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim65Q8BFW4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim65Q8BFW4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim65Q8BFW4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim65Q8BFW4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim65Q8BFW4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim65Q8BFW4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim65Q8BFW4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim65Q8BFW4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim65Q8BFW4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim65Q8BFW4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim65Q8BFW4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim65Q8BFW4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim65Q8BFW4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim65Q8BFW4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim65Q8BFW4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim65Q8BFW4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim65Q8BFW4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17■□□□□ 0.31
Trim65Q8BFW4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Trim65Q8BFW4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim65Q8BFW4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim65Q8BFW4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim65Q8BFW4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17■□□□□ 0.31
Trim65Q8BFW4 Gm8349-201ENSMUST00000182720 1003 ntBASIC17■□□□□ 0.31
Trim65Q8BFW4 Gm44454-201ENSMUST00000198541 138 ntBASIC17■□□□□ 0.31
Trim65Q8BFW4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17■□□□□ 0.31
Trim65Q8BFW4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17■□□□□ 0.31
Trim65Q8BFW4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim65Q8BFW4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim65Q8BFW4 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim65Q8BFW4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim65Q8BFW4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim65Q8BFW4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim65Q8BFW4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim65Q8BFW4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim65Q8BFW4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim65Q8BFW4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim65Q8BFW4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim65Q8BFW4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim65Q8BFW4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim65Q8BFW4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.99■□□□□ 0.31
Trim65Q8BFW4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim65Q8BFW4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim65Q8BFW4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim65Q8BFW4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim65Q8BFW4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim65Q8BFW4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trim65Q8BFW4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim65Q8BFW4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim65Q8BFW4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim65Q8BFW4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trim65Q8BFW4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim65Q8BFW4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim65Q8BFW4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim65Q8BFW4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim65Q8BFW4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim65Q8BFW4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim65Q8BFW4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim65Q8BFW4 Gm25406-201ENSMUST00000157599 105 ntBASIC16.98■□□□□ 0.31
Trim65Q8BFW4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim65Q8BFW4 Gm27357-201ENSMUST00000183754 135 ntBASIC16.98■□□□□ 0.31
Trim65Q8BFW4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.98■□□□□ 0.31
Trim65Q8BFW4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim65Q8BFW4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim65Q8BFW4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trim65Q8BFW4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim65Q8BFW4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim65Q8BFW4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trim65Q8BFW4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim65Q8BFW4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim65Q8BFW4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.98■□□□□ 0.31
Trim65Q8BFW4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim65Q8BFW4 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim65Q8BFW4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim65Q8BFW4 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim65Q8BFW4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim65Q8BFW4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim65Q8BFW4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim65Q8BFW4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim65Q8BFW4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Trim65Q8BFW4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Trim65Q8BFW4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Trim65Q8BFW4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Trim65Q8BFW4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.97■□□□□ 0.31
Trim65Q8BFW4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.97■□□□□ 0.31
Trim65Q8BFW4 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.97■□□□□ 0.31
Trim65Q8BFW4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim65Q8BFW4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim65Q8BFW4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.97■□□□□ 0.31
Trim65Q8BFW4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim65Q8BFW4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim65Q8BFW4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim65Q8BFW4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim65Q8BFW4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim65Q8BFW4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms