Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ccdc116Q80X53 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc116Q80X53 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc116Q80X53 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc116Q80X53 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc116Q80X53 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc116Q80X53 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ccdc116Q80X53 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc116Q80X53 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc116Q80X53 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccdc116Q80X53 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.53■□□□□ 0.08
Ccdc116Q80X53 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ccdc116Q80X53 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ccdc116Q80X53 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ccdc116Q80X53 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc116Q80X53 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc116Q80X53 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccdc116Q80X53 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc116Q80X53 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc116Q80X53 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc116Q80X53 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc116Q80X53 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc116Q80X53 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc116Q80X53 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Ccdc116Q80X53 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.52■□□□□ 0.08
Ccdc116Q80X53 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc116Q80X53 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc116Q80X53 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc116Q80X53 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc116Q80X53 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc116Q80X53 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc116Q80X53 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc116Q80X53 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.52■□□□□ 0.08
Ccdc116Q80X53 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc116Q80X53 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ccdc116Q80X53 Olfr129-201ENSMUST00000122318 993 ntBASIC15.52■□□□□ 0.08
Ccdc116Q80X53 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc116Q80X53 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc116Q80X53 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.52■□□□□ 0.08
Ccdc116Q80X53 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.52■□□□□ 0.08
Ccdc116Q80X53 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc116Q80X53 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc116Q80X53 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc116Q80X53 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc116Q80X53 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Ccdc116Q80X53 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc116Q80X53 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc116Q80X53 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc116Q80X53 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc116Q80X53 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc116Q80X53 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc116Q80X53 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc116Q80X53 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc116Q80X53 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc116Q80X53 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc116Q80X53 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc116Q80X53 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc116Q80X53 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc116Q80X53 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc116Q80X53 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc116Q80X53 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc116Q80X53 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms