Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Gm13186-201ENSMUST00000118031 316 ntBASIC15.34■□□□□ 0.05
Trim36Q80WG7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Gm26039-201ENSMUST00000158152 144 ntBASIC15.34■□□□□ 0.05
Trim36Q80WG7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.34■□□□□ 0.05
Trim36Q80WG7 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.34■□□□□ 0.05
Trim36Q80WG7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.34■□□□□ 0.05
Trim36Q80WG7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trim36Q80WG7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim36Q80WG7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim36Q80WG7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim36Q80WG7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.33■□□□□ 0.05
Trim36Q80WG7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim36Q80WG7 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim36Q80WG7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim36Q80WG7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim36Q80WG7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim36Q80WG7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trim36Q80WG7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim36Q80WG7 Gm11355-201ENSMUST00000121120 306 ntBASIC15.33■□□□□ 0.04
Trim36Q80WG7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim36Q80WG7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim36Q80WG7 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim36Q80WG7 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim36Q80WG7 Prob1-201ENSMUST00000097619 3021 ntBASIC15.33■□□□□ 0.04
Trim36Q80WG7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.33■□□□□ 0.04
Trim36Q80WG7 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim36Q80WG7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trim36Q80WG7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim36Q80WG7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trim36Q80WG7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim36Q80WG7 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim36Q80WG7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim36Q80WG7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim36Q80WG7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim36Q80WG7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim36Q80WG7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Trim36Q80WG7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim36Q80WG7 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trim36Q80WG7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim36Q80WG7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim36Q80WG7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim36Q80WG7 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim36Q80WG7 Gm9103-201ENSMUST00000119371 405 ntBASIC15.32■□□□□ 0.04
Trim36Q80WG7 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim36Q80WG7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim36Q80WG7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim36Q80WG7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim36Q80WG7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim36Q80WG7 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim36Q80WG7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim36Q80WG7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim36Q80WG7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim36Q80WG7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Phf7-203ENSMUST00000226565 1971 ntBASIC15.31■□□□□ 0.04
Trim36Q80WG7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim36Q80WG7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Gm27704-201ENSMUST00000185094 107 ntBASIC15.31■□□□□ 0.04
Trim36Q80WG7 Gm17808-201ENSMUST00000200859 894 ntBASIC15.31■□□□□ 0.04
Trim36Q80WG7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim36Q80WG7 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms