Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh19Q80TF3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Gm11780-201ENSMUST00000136880 516 ntBASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdh19Q80TF3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Gm6550-201ENSMUST00000187574 993 ntBASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Gm18622-201ENSMUST00000219361 595 ntBASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Pcdh19Q80TF3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 Gm12350-201ENSMUST00000121208 462 ntBASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 AV026068-213ENSMUST00000223675 1171 ntBASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdh19Q80TF3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh19Q80TF3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh19Q80TF3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.52■□□□□ 0.07
Pcdh19Q80TF3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh19Q80TF3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh19Q80TF3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdh19Q80TF3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdh19Q80TF3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh19Q80TF3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdh19Q80TF3 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.51■□□□□ 0.07
Pcdh19Q80TF3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh19Q80TF3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh19Q80TF3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh19Q80TF3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdh19Q80TF3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.51■□□□□ 0.07
Pcdh19Q80TF3 AW822252-206ENSMUST00000208904 237 ntBASIC15.51■□□□□ 0.07
Pcdh19Q80TF3 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.51■□□□□ 0.07
Pcdh19Q80TF3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh19Q80TF3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pcdh19Q80TF3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms