Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt39Q6IFX4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt39Q6IFX4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Krt39Q6IFX4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Krt39Q6IFX4 Gm37722-201ENSMUST00000193757 208 ntBASIC17.57■□□□□ 0.4
Krt39Q6IFX4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt39Q6IFX4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt39Q6IFX4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt39Q6IFX4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt39Q6IFX4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt39Q6IFX4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt39Q6IFX4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Krt39Q6IFX4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt39Q6IFX4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Krt39Q6IFX4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt39Q6IFX4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt39Q6IFX4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Krt39Q6IFX4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Krt39Q6IFX4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt39Q6IFX4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt39Q6IFX4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Krt39Q6IFX4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
Krt39Q6IFX4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.56■□□□□ 0.4
Krt39Q6IFX4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt39Q6IFX4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.56■□□□□ 0.4
Krt39Q6IFX4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt39Q6IFX4 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Krt39Q6IFX4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Krt39Q6IFX4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.56■□□□□ 0.4
Krt39Q6IFX4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.56■□□□□ 0.4
Krt39Q6IFX4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.56■□□□□ 0.4
Krt39Q6IFX4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt39Q6IFX4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Krt39Q6IFX4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Krt39Q6IFX4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt39Q6IFX4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt39Q6IFX4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Krt39Q6IFX4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt39Q6IFX4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Krt39Q6IFX4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Krt39Q6IFX4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Krt39Q6IFX4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.55■□□□□ 0.4
Krt39Q6IFX4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt39Q6IFX4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt39Q6IFX4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt39Q6IFX4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Krt39Q6IFX4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt39Q6IFX4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt39Q6IFX4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Krt39Q6IFX4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Krt39Q6IFX4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Krt39Q6IFX4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt39Q6IFX4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt39Q6IFX4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt39Q6IFX4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt39Q6IFX4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt39Q6IFX4 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt39Q6IFX4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Krt39Q6IFX4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Krt39Q6IFX4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Krt39Q6IFX4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.55■□□□□ 0.4
Krt39Q6IFX4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt39Q6IFX4 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.54■□□□□ 0.4
Krt39Q6IFX4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.54■□□□□ 0.4
Krt39Q6IFX4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.54■□□□□ 0.4
Krt39Q6IFX4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Krt39Q6IFX4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt39Q6IFX4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.54■□□□□ 0.4
Krt39Q6IFX4 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.54■□□□□ 0.4
Krt39Q6IFX4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.54■□□□□ 0.4
Krt39Q6IFX4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Krt39Q6IFX4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Krt39Q6IFX4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt39Q6IFX4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt39Q6IFX4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.54■□□□□ 0.4
Krt39Q6IFX4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Krt39Q6IFX4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Krt39Q6IFX4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Krt39Q6IFX4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.54■□□□□ 0.4
Krt39Q6IFX4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt39Q6IFX4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt39Q6IFX4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.53■□□□□ 0.4
Krt39Q6IFX4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt39Q6IFX4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt39Q6IFX4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt39Q6IFX4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt39Q6IFX4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Krt39Q6IFX4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt39Q6IFX4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt39Q6IFX4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Krt39Q6IFX4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt39Q6IFX4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt39Q6IFX4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt39Q6IFX4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt39Q6IFX4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.53■□□□□ 0.4
Krt39Q6IFX4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.53■□□□□ 0.4
Krt39Q6IFX4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Krt39Q6IFX4 Gm22697-201ENSMUST00000175194 63 ntBASIC17.53■□□□□ 0.4
Krt39Q6IFX4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.53■□□□□ 0.4
Krt39Q6IFX4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms