Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Commd3Q63829 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Commd3Q63829 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Commd3Q63829 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Commd3Q63829 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Commd3Q63829 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.26□□□□□ -0.29
Commd3Q63829 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Commd3Q63829 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Commd3Q63829 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
Commd3Q63829 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.26□□□□□ -0.29
Commd3Q63829 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.26□□□□□ -0.29
Commd3Q63829 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Commd3Q63829 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Commd3Q63829 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Commd3Q63829 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Commd3Q63829 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Commd3Q63829 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.26□□□□□ -0.29
Commd3Q63829 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Commd3Q63829 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Commd3Q63829 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Commd3Q63829 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.25□□□□□ -0.29
Commd3Q63829 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Commd3Q63829 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Commd3Q63829 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Commd3Q63829 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Commd3Q63829 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Commd3Q63829 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Commd3Q63829 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Commd3Q63829 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Commd3Q63829 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Commd3Q63829 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Commd3Q63829 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Commd3Q63829 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Commd3Q63829 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.25□□□□□ -0.29
Commd3Q63829 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Commd3Q63829 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Commd3Q63829 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.25□□□□□ -0.29
Commd3Q63829 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Commd3Q63829 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Commd3Q63829 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Commd3Q63829 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Commd3Q63829 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Commd3Q63829 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.25□□□□□ -0.29
Commd3Q63829 Gm42569-201ENSMUST00000200539 472 ntBASIC13.25□□□□□ -0.29
Commd3Q63829 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Commd3Q63829 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Commd3Q63829 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Commd3Q63829 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Commd3Q63829 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Commd3Q63829 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.25□□□□□ -0.29
Commd3Q63829 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Commd3Q63829 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Commd3Q63829 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.24□□□□□ -0.29
Commd3Q63829 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Commd3Q63829 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Commd3Q63829 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.24□□□□□ -0.29
Commd3Q63829 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Commd3Q63829 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Commd3Q63829 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Commd3Q63829 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Commd3Q63829 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Commd3Q63829 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.24□□□□□ -0.29
Commd3Q63829 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Commd3Q63829 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.24□□□□□ -0.29
Commd3Q63829 Gm26571-201ENSMUST00000181399 666 ntBASIC13.24□□□□□ -0.29
Commd3Q63829 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.24□□□□□ -0.29
Commd3Q63829 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Commd3Q63829 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Commd3Q63829 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Commd3Q63829 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.24□□□□□ -0.29
Commd3Q63829 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Commd3Q63829 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Commd3Q63829 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Commd3Q63829 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Commd3Q63829 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Commd3Q63829 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Commd3Q63829 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Commd3Q63829 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Commd3Q63829 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Commd3Q63829 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Commd3Q63829 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Commd3Q63829 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Commd3Q63829 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Commd3Q63829 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Commd3Q63829 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Commd3Q63829 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Commd3Q63829 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Commd3Q63829 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Commd3Q63829 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Commd3Q63829 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Commd3Q63829 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Commd3Q63829 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Commd3Q63829 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.23□□□□□ -0.29
Commd3Q63829 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.23□□□□□ -0.29
Commd3Q63829 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Commd3Q63829 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.23□□□□□ -0.29
Commd3Q63829 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.23□□□□□ -0.29
Commd3Q63829 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Commd3Q63829 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Commd3Q63829 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms