Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Notch3Q61982 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Notch3Q61982 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Notch3Q61982 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Notch3Q61982 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Notch3Q61982 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Notch3Q61982 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Notch3Q61982 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Notch3Q61982 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Notch3Q61982 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Notch3Q61982 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Notch3Q61982 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Notch3Q61982 Gm13036-201ENSMUST00000117799 748 ntBASIC12.19□□□□□ -0.46
Notch3Q61982 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Notch3Q61982 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.19□□□□□ -0.46
Notch3Q61982 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Notch3Q61982 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Notch3Q61982 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.19□□□□□ -0.46
Notch3Q61982 Gm2213-201ENSMUST00000197485 688 ntBASIC12.19□□□□□ -0.46
Notch3Q61982 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
Notch3Q61982 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Notch3Q61982 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Notch3Q61982 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Notch3Q61982 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Notch3Q61982 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.18□□□□□ -0.46
Notch3Q61982 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.18□□□□□ -0.46
Notch3Q61982 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.18□□□□□ -0.46
Notch3Q61982 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Notch3Q61982 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.18□□□□□ -0.46
Notch3Q61982 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.18□□□□□ -0.46
Notch3Q61982 Gm7506-201ENSMUST00000207758 815 ntBASIC12.18□□□□□ -0.46
Notch3Q61982 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Notch3Q61982 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Gm42900-201ENSMUST00000197184 2167 ntBASIC12.18□□□□□ -0.46
Notch3Q61982 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Notch3Q61982 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Notch3Q61982 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Notch3Q61982 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Notch3Q61982 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Notch3Q61982 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Notch3Q61982 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.17□□□□□ -0.46
Notch3Q61982 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.17□□□□□ -0.46
Notch3Q61982 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Notch3Q61982 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Notch3Q61982 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.17□□□□□ -0.46
Notch3Q61982 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Notch3Q61982 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Notch3Q61982 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.17□□□□□ -0.46
Notch3Q61982 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Notch3Q61982 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Notch3Q61982 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Notch3Q61982 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Notch3Q61982 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Notch3Q61982 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.17□□□□□ -0.46
Notch3Q61982 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Notch3Q61982 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Notch3Q61982 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.17□□□□□ -0.46
Notch3Q61982 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.17□□□□□ -0.46
Notch3Q61982 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.17□□□□□ -0.46
Notch3Q61982 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.17□□□□□ -0.46
Notch3Q61982 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.17□□□□□ -0.46
Notch3Q61982 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.17□□□□□ -0.46
Notch3Q61982 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Notch3Q61982 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Notch3Q61982 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Notch3Q61982 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Notch3Q61982 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Notch3Q61982 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Notch3Q61982 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Notch3Q61982 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Notch3Q61982 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Notch3Q61982 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Notch3Q61982 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Notch3Q61982 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Notch3Q61982 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms