Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6-2Q5R1I4 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Gm23935-201ENSMUST00000102303 57 ntBASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Gm24270-201ENSMUST00000102326 57 ntBASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Gm24245-201ENSMUST00000157318 57 ntBASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6-2Q5R1I4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav6-2Q5R1I4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Trav6-2Q5R1I4 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Trav6-2Q5R1I4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav6-2Q5R1I4 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.89□□□□□ -0.19
Trav6-2Q5R1I4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Trav6-2Q5R1I4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-2Q5R1I4 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-2Q5R1I4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-2Q5R1I4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav6-2Q5R1I4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.89□□□□□ -0.19
Trav6-2Q5R1I4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-2Q5R1I4 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.89□□□□□ -0.19
Trav6-2Q5R1I4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-2Q5R1I4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-2Q5R1I4 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav6-2Q5R1I4 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav6-2Q5R1I4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-2Q5R1I4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav6-2Q5R1I4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav6-2Q5R1I4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-2Q5R1I4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-2Q5R1I4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-2Q5R1I4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6-2Q5R1I4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Gm4995-201ENSMUST00000117247 432 ntBASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6-2Q5R1I4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Gm17271-201ENSMUST00000165535 355 ntBASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6-2Q5R1I4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms