Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Gm9731-201ENSMUST00000209480 747 ntBASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav8d-1Q5R1H8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav8d-1Q5R1H8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trav8d-1Q5R1H8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav8d-1Q5R1H8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav8d-1Q5R1H8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav8d-1Q5R1H8 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav8d-1Q5R1H8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav8d-1Q5R1H8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav8d-1Q5R1H8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav8d-1Q5R1H8 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Gm7638-201ENSMUST00000121348 967 ntBASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav8d-1Q5R1H8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms