Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5d-4Q5R1F6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5d-4Q5R1F6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5d-4Q5R1F6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav5d-4Q5R1F6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav5d-4Q5R1F6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5d-4Q5R1F6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5d-4Q5R1F6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5d-4Q5R1F6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5d-4Q5R1F6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5d-4Q5R1F6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5d-4Q5R1F6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav5d-4Q5R1F6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5d-4Q5R1F6 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5d-4Q5R1F6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav5d-4Q5R1F6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav5d-4Q5R1F6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.65□□□□□ -0.23
Trav5d-4Q5R1F6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Gm45328-201ENSMUST00000210942 917 ntBASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5d-4Q5R1F6 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.63□□□□□ -0.23
Trav5d-4Q5R1F6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms