Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Mir6349-201ENSMUST00000184059 97 ntBASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Gm8495-201ENSMUST00000188740 694 ntBASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Gm42569-201ENSMUST00000200539 472 ntBASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3-3Q5R1C3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3-3Q5R1C3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Trav3-3Q5R1C3 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3-3Q5R1C3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.96□□□□□ -0.5
Trav3-3Q5R1C3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trav3-3Q5R1C3 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.96□□□□□ -0.5
Trav3-3Q5R1C3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3-3Q5R1C3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trav3-3Q5R1C3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3-3Q5R1C3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3-3Q5R1C3 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Trav3-3Q5R1C3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.96□□□□□ -0.5
Trav3-3Q5R1C3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3-3Q5R1C3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Trav3-3Q5R1C3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3-3Q5R1C3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3-3Q5R1C3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Gm26524-201ENSMUST00000192339 390 ntBASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Gm43272-201ENSMUST00000200599 1584 ntBASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-3Q5R1C3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 App-207ENSMUST00000227737 2827 ntBASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Gm12933-201ENSMUST00000120203 872 ntBASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3-3Q5R1C3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav3-3Q5R1C3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms