Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Srrm1Q52KI8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Srrm1Q52KI8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Srrm1Q52KI8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Srrm1Q52KI8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srrm1Q52KI8 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Gm27494-201ENSMUST00000184735 189 ntBASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Gm44335-201ENSMUST00000196879 141 ntBASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Gm44297-201ENSMUST00000198304 141 ntBASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Gm44346-201ENSMUST00000198851 141 ntBASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srrm1Q52KI8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Srrm1Q52KI8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm1Q52KI8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm1Q52KI8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm1Q52KI8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm1Q52KI8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Srrm1Q52KI8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Srrm1Q52KI8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm1Q52KI8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm1Q52KI8 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.71■□□□□ 0.43
Srrm1Q52KI8 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm1Q52KI8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm1Q52KI8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm1Q52KI8 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Srrm1Q52KI8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.71■□□□□ 0.43
Srrm1Q52KI8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.71■□□□□ 0.43
Srrm1Q52KI8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm1Q52KI8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm1Q52KI8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm1Q52KI8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm1Q52KI8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm1Q52KI8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm1Q52KI8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm1Q52KI8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Srrm1Q52KI8 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Srrm1Q52KI8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.7■□□□□ 0.42
Srrm1Q52KI8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.7■□□□□ 0.42
Srrm1Q52KI8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.7■□□□□ 0.42
Srrm1Q52KI8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm1Q52KI8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Srrm1Q52KI8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm1Q52KI8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.7■□□□□ 0.42
Srrm1Q52KI8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.7■□□□□ 0.42
Srrm1Q52KI8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm1Q52KI8 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm1Q52KI8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Srrm1Q52KI8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm1Q52KI8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm1Q52KI8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm1Q52KI8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm1Q52KI8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm1Q52KI8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm1Q52KI8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm1Q52KI8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm1Q52KI8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm1Q52KI8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms